9. Appendix

9.1 FID

Free Induction Decay of an NMR signal in a 1D experiment with a 50 msec expansion showing the digitization of the signal.


9.2 Digital resolution

All spectra at 600 MHz with 10 ppm sweep width (6000 Hz). The digital resolution is shown next to spectrum.

dig_res_eq.gif (3156 bytes)

1D_dres0.18-2.9.gif (13437 bytes)


number of data points (np): 4K
Fourier number (fn): 4K
acquisition time: 0.35 sec
zero-filling: none


number of data points (np): 8K
Fourier number (fn): 8K
acquisition time: 0.70 sec
zero-filling: none

number of data points (np): 16K
Fourier number (fn): 16K
acquisition time: 1.40 sec
zero-filling: none

number of data points (np): 24K
Fourier number (fn): 32K
acquisition time: 2.00 sec
zero-filling: 1.33 x

number of data points (np): 24K
Fourier number (fn): 64K
acquisition time: 2.00 sec
zero-filling: 2.66 x


9.3 Sep-Pak filtration for carbohydrates (courtesy Dr. Gordon Alton)
For oligosaccharides with hydrophobic
aglycons the following conditions are recommended for C18 Sep-Pak cartridges:

  1. Wash with 5 mL of methanol then 10 mL of water

  2. Load oligosaccharide in water or buffer, the more dilute the better, use a flow rate of less than 10 mL/min (slower is better)

  3. Wash cartridge with 10 mL of water (flow rate is not important),
    keep all solutions until you know where the carbohydrate is!

  4. Elute oligosaccharide with 5 or 10 mL of methanol.

One C18 Sep-Pak can hold up to 10 mg of an octyl glycoside trisaccharide, but is different for each sugar, aglycon, flow rate and load buffer situation. Determine experimentally what works best for your compound.

9.4 HETCOR vs. HMQC

HETCOR, i.e. direct detection of heteronuclei in 2D NMR is inefficient and the information of experiments recorded with indirect detection (gHMQC, gHMBC and similar techniques) is nearly identical as shown below:

Methods to record correlations between protons and heteroatoms:

 

HETCOR

gHMQC

gHMBC

basis for correlations

1JCH

1JCH

3JCH  (2JCH)

application

direct 13C/1H correlations

direct 13C/1H correlations

long range 13C/1H

recorded nucleus

13C

1H

1H

high resolution axis (F2)

13C

1H

1H

low resolution axis (F1)

1H

13C

13C

overall sensitivity

low

e.g. 1

formula_HMQCsensitivity.gif (1195 bytes): 8 (a)

--

time to reach certain s/n

long

 

e.g. 16 hours

formula_HMQCtime.gif (1171 bytes): 1/64 (a)
< 1 hour

--

values of CH coupling constants

yes
if dm=’nnn’

yes
if dm=’nnn’

difficult

decoupling (i300)

1H: ~ 3 kHz

13C: ~15 kHz

no

(a) values relative to HETCOR; based on use of an indirect detection probe (sensitivity gain is lower with sw and asw probes)


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